gwlearn.base.BaseRegressor#
- class gwlearn.base.BaseRegressor(model, *, bandwidth=None, fixed=False, kernel='bisquare', include_focal=False, geometry=None, graph=None, n_jobs=-1, fit_global_model=True, measure_performance=True, strict=False, keep_models=False, temp_folder=None, batch_size=None, verbose=False, **kwargs)[source]#
Generic geographically weighted regression meta-class
- TODO:
tvalues & adj_alpha & critical_t val
predict
performance measurements
- Parameters:
- model
model
class
Scikit-learn model class
- bandwidth
int
|float
Bandwidth value consisting of either a distance or N nearest neighbors
- fixedbool,
optional
True for distance based bandwidth and False for adaptive (nearest neighbor) bandwidth, by default False
- kernel
str
|Callable
,optional
Type of kernel function used to weight observations, by default “bisquare”
- include_focalbool,
optional
Include focal in the local model training. Excluding it allows assessment of geographically weighted metrics on unseen data without a need for train/test split, hence providing value for all samples. This is needed for further spatial analysis of the model performance (and generalises to models that do not support OOB scoring). However, it leaves out the most representative sample. By default False
- geometry
gpd.GeoSeries
,optional
Geographic location of the observations in the sample. Used to determine the spatial interaction weight based on specification by
bandwidth
,fixed
,kernel
, andinclude_focal
keywords. Eithergeometry
orgraph
need to be specified. To allow prediction, it is required to specifygeometry
.- graph
Graph
,optional
Custom libpysal.graph.Graph object encoding the spatial interaction between observations in the sample. If given, it is used directly and
bandwidth
,fixed
,kernel
, andinclude_focal
keywords are ignored. Eithergeometry
orgraph
need to be specified. To allow prediction, it is required to specifygeometry
. Potentially, both can be specified wheregraph
encodes spatial interaction between observations ingeometry
.- n_jobs
int
,optional
The number of jobs to run in parallel.
-1
means using all processors by default-1
- fit_global_modelbool,
optional
Determines if the global baseline model shall be fitted alongside the geographically weighted, by default True
- measure_performancebool,
optional
Calculate performance metrics for the model, by default True. If True, measures R2 and adjusted R2.
- strictbool |
None
,optional
Do not fit any models if at least one neighborhood has invariant
y
, by default False. None is treated as False but provides a warning if there are invariant models.- keep_modelsbool |
str
|Path
,optional
Keep all local models (required for prediction), by default False. Note that for some models, like random forests, the objects can be large. If string or Path is provided, the local models are not held in memory but serialized to the disk from which they are loaded in prediction.
- temp_folder
str
|None
,optional
Folder to be used by the pool for memmapping large arrays for sharing memory with worker processes, e.g.,
/tmp
. Passed tojoblib.Parallel
, by default None- batch_size
int
|None
,optional
Number of models to process in each batch. Specify batch_size if your models do not fit into memory. By default None
- random_state
int
|None
,optional
Random seed for reproducibility, by default None
- verbosebool,
optional
Whether to print progress information, by default False
- **kwargs
Additional keyword arguments passed to
model
initialisation
- model
- Attributes:
- pred_
pd.Series
Focal predictions for each location.
- resid_
pd.Series
Residuals for each location (y - pred_).
- RSS_
pd.Series
Residual sum of squares for each location.
- TSS_
pd.Series
Total sum of squares for each location.
- y_bar_
pd.Series
Weighted mean of y for each location.
- local_r2_
pd.Series
Local R2 for each location.
- focal_r2_
float
Global R2 for focal predictions.
- score_
float
Alias for focal_r2_ (global R2 for focal predictions).
- focal_adj_r2_
float
Adjusted R2 for focal predictions.
- hat_values_
pd.Series
Hat values for each location (diagonal elements of hat matrix).
- effective_df_
float
Effective degrees of freedom (sum of hat values).
- log_likelihood_
float
Global log likelihood of the model.
- aic_
float
Akaike information criterion of the model.
- aicc_
float
Corrected Akaike information criterion to account for model complexity (smaller bandwidths).
- bic_
float
Bayesian information criterion.
- pred_
- __init__(model, *, bandwidth=None, fixed=False, kernel='bisquare', include_focal=False, geometry=None, graph=None, n_jobs=-1, fit_global_model=True, measure_performance=True, strict=False, keep_models=False, temp_folder=None, batch_size=None, verbose=False, **kwargs)#
Methods
__init__
(model, *[, bandwidth, fixed, ...])fit
(X, y)Fit the geographically weighted model
get_metadata_routing
()Get metadata routing of this object.
get_params
([deep])Get parameters for this estimator.
score
(X, y[, sample_weight])Return the coefficient of determination of the prediction.
set_fit_request
(*[, geometry])Request metadata passed to the
fit
method.set_params
(**params)Set the parameters of this estimator.
set_score_request
(*[, sample_weight])Request metadata passed to the
score
method.- fit(X, y)[source]#
Fit the geographically weighted model
- Parameters:
- X
pd.DataFrame
Independent variables
- y
pd.Series
Dependent variable
- geometry
gpd.GeoSeries
Geographic location
- X
- set_score_request(*, sample_weight='$UNCHANGED$')#
Request metadata passed to the
score
method.Note that this method is only relevant if
enable_metadata_routing=True
(seesklearn.set_config()
). Please see User Guide on how the routing mechanism works.The options for each parameter are:
True
: metadata is requested, and passed toscore
if provided. The request is ignored if metadata is not provided.False
: metadata is not requested and the meta-estimator will not pass it toscore
.None
: metadata is not requested, and the meta-estimator will raise an error if the user provides it.str
: metadata should be passed to the meta-estimator with this given alias instead of the original name.
The default (
sklearn.utils.metadata_routing.UNCHANGED
) retains the existing request. This allows you to change the request for some parameters and not others.Added in version 1.3.
Note
This method is only relevant if this estimator is used as a sub-estimator of a meta-estimator, e.g. used inside a
Pipeline
. Otherwise it has no effect.